8OI9: Trichomonas vaginalis riboside hydrolase in complex with 5-methyluridine

PDB ID: 8OI9Download
MMDB ID: 233644
PDB Deposition Date: 2023/3/22
Updated in MMDB: 2023/09
Experimental Method:
x-ray diffraction
Resolution: 1.95  Å
Source Organism:
Similar Structures:
Biological Unit for 8OI9: tetrameric; determined by author
Molecular Components in 8OI9
Label Count Molecule
Proteins (4 molecules)
4
Inosine-uridine Preferring Nucleoside Hydrolase Family Protein
Molecule annotation
Chemicals and Non-standard biopolymers (18 molecules)
1
4
CALCIUM IONCALCIUM ION
2
4
5-methyluridine5-methyluridine
3
2
PIPERAZINE-N,N'-BIS(2-ETHANESULFONIC ACID)PIPERAZINE-N,N'-BIS(2-ETHANESULFONIC ACID)
4
4
MAGNESIUM IONMAGNESIUM ION
5
2
SULFATE IONSULFATE ION
6
2
NICKEL (II) IONNICKEL (II) ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303