8KD6: Rpd3S in complex with nucleosome with H3K36MLA modification and 187bp DNA, class3

PDB ID: 8KD6Download
MMDB ID: 235496
PDB Deposition Date: 2023/8/9
Updated in MMDB: 2023/10
Experimental Method:
electron microscopy
Resolution: 3.07  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 8KD6: hexadecameric; determined by author
Molecular Components in 8KD6
Label Count Molecule
Proteins (14 molecules)
2
Chromatin Modification-related Protein Eaf3
Molecule annotation
2
Histone H3
Molecule annotation
2
Histone H4
Molecule annotation
2
Histone H2A
Molecule annotation
2
Histone H2B 1.1
Molecule annotation
1
Histone Deacetylase Rpd3
Molecule annotation
1
Transcriptional Regulatory Protein Sin3
Molecule annotation
2
Transcriptional Regulatory Protein Rco1
Molecule annotation
Nucleotides(2 molecules)
1
187bp DNA
Molecule annotation
1
187bp DNA
Molecule annotation
Chemical and Non-standard biopolymers (1 molecule)
1
1
ZINC IONZINC ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303