8K82: Cryo-EM structure of the yeast 80S ribosome with tigecycline, Not5 and P-site tRNA

PDB ID: 8K82Download
MMDB ID: 249449
PDB Deposition Date: 2023/7/28
Updated in MMDB: 2024/07
Experimental Method:
electron microscopy
Resolution: 3  Å
Source Organism:
Similar Structures:
Biological Unit for 8K82: 85-meric; determined by author
Molecular Components in 8K82
Label Count Molecule
Proteins (79 molecules)
1
Small Ribosomal Subunit Protein Us2a
Molecule annotation
1
40S Ribosomal Protein S1-a
Molecule annotation
1
40S Ribosomal Protein S2
Molecule annotation
1
Small Ribosomal Subunit Protein US3
Molecule annotation
1
40S Ribosomal Protein S4-a
Molecule annotation
1
Small Ribosomal Subunit Protein US7
Molecule annotation
1
40S Ribosomal Protein S6-a
Molecule annotation
1
40S Ribosomal Protein S7-a
Molecule annotation
1
40S Ribosomal Protein S8-a
Molecule annotation
1
40S Ribosomal Protein S9-a
Molecule annotation
1
Small Ribosomal Subunit Protein Es10a
Molecule annotation
1
Small Ribosomal Subunit Protein Us17a
Molecule annotation
1
Small Ribosomal Subunit Protein Es12
Molecule annotation
1
40S Ribosomal Protein S13
Molecule annotation
1
40S Ribosomal Protein S14-a
Molecule annotation
1
Small Ribosomal Subunit Protein Us19
Molecule annotation
1
Small Ribosomal Subunit Protein Us9a
Molecule annotation
1
Small Ribosomal Subunit Protein Es17a
Molecule annotation
1
Small Ribosomal Subunit Protein Us13a
Molecule annotation
1
Small Ribosomal Subunit Protein Es19a
Molecule annotation
1
Small Ribosomal Subunit Protein Us10
Molecule annotation
1
Small Ribosomal Subunit Protein Es21a
Molecule annotation
1
40S Ribosomal Protein S22-a
Molecule annotation
1
40S Ribosomal Protein S23-a
Molecule annotation
1
40S Ribosomal Protein S24-a
Molecule annotation
1
Small Ribosomal Subunit Protein Es25a
Molecule annotation
1
Small Ribosomal Subunit Protein Es26b
Molecule annotation
1
40S Ribosomal Protein S27-a
Molecule annotation
1
Small Ribosomal Subunit Protein Es28a
Molecule annotation
1
Small Ribosomal Subunit Protein Us14a
Molecule annotation
1
40S Ribosomal Protein S30-a
Molecule annotation
1
Ubiquitin-ribosomal Protein Es31 Fusion Protein
Molecule annotation
1
Small Ribosomal Subunit Protein Rack1
Molecule annotation
1
Large Ribosomal Subunit Protein Ul2a
Molecule annotation
1
Large Ribosomal Subunit Protein UL3
Molecule annotation
1
Large Ribosomal Subunit Protein Ul4a
Molecule annotation
1
Large Ribosomal Subunit Protein Ul18
Molecule annotation
1
Large Ribosomal Subunit Protein El6a
Molecule annotation
1
Large Ribosomal Subunit Protein Ul30a
Molecule annotation
1
Large Ribosomal Subunit Protein El8a
Molecule annotation
1
Large Ribosomal Subunit Protein Ul6a
Molecule annotation
1
Large Ribosomal Subunit Protein Ul16
Molecule annotation
1
Large Ribosomal Subunit Protein Ul5a
Molecule annotation
1
Large Ribosomal Subunit Protein Ul11a
Molecule annotation
1
Large Ribosomal Subunit Protein El13a
Molecule annotation
1
Large Ribosomal Subunit Protein El14a
Molecule annotation
1
Large Ribosomal Subunit Protein El15a
Molecule annotation
1
Large Ribosomal Subunit Protein Ul13a
Molecule annotation
1
Large Ribosomal Subunit Protein Ul22a
Molecule annotation
1
Large Ribosomal Subunit Protein El18a
Molecule annotation
1
Large Ribosomal Subunit Protein El19a
Molecule annotation
1
Large Ribosomal Subunit Protein El20a
Molecule annotation
1
Large Ribosomal Subunit Protein El21a
Molecule annotation
1
Large Ribosomal Subunit Protein El22a
Molecule annotation
1
Large Ribosomal Subunit Protein Ul14a
Molecule annotation
1
Large Ribosomal Subunit Protein El24a
Molecule annotation
1
Large Ribosomal Subunit Protein Ul23
Molecule annotation
1
Large Ribosomal Subunit Protein Ul24a
Molecule annotation
1
Large Ribosomal Subunit Protein El27a
Molecule annotation
1
Large Ribosomal Subunit Protein Ul15
Molecule annotation
1
Large Ribosomal Subunit Protein El29
Molecule annotation
1
Large Ribosomal Subunit Protein El30
Molecule annotation
1
Large Ribosomal Subunit Protein El31a
Molecule annotation
1
Large Ribosomal Subunit Protein El32
Molecule annotation
1
Large Ribosomal Subunit Protein El33a
Molecule annotation
1
Large Ribosomal Subunit Protein El34a
Molecule annotation
1
Large Ribosomal Subunit Protein Ul29a
Molecule annotation
1
Large Ribosomal Subunit Protein El36a
Molecule annotation
1
Large Ribosomal Subunit Protein El37a
Molecule annotation
1
Large Ribosomal Subunit Protein El38
Molecule annotation
1
Large Ribosomal Subunit Protein El39
Molecule annotation
1
Ubiquitin-ribosomal Protein El40a Fusion Protein
Molecule annotation
2
Large Ribosomal Subunit Protein El41a
Molecule annotation
1
Large Ribosomal Subunit Protein El42a
Molecule annotation
1
Large Ribosomal Subunit Protein El43a
Molecule annotation
1
Large Ribosomal Subunit Protein Ul1a
Molecule annotation
1
Large Ribosomal Subunit Protein Ul10
Molecule annotation
1
General Negative Regulator of Transcription Subunit 5
Molecule annotation
Nucleotides(6 molecules)
1
18S rRNA
Molecule annotation
1
mRNA
Molecule annotation
1
tRNA
Molecule annotation
1
23S rRNA
Molecule annotation
1
5S rRNA
Molecule annotation
1
5.8s rRNA
Molecule annotation
Chemicals and Non-standard biopolymers (332 molecules)
316
6
1
9
* Click molecule labels to explore molecular sequence information.

Citing MMDB