8JUR: Crystal structure of Chitoporin from Vibrio harveyi in complex with gentamicin c1a (multiple binding sites)

PDB ID: 8JURDownload
MMDB ID: 249094
PDB Deposition Date: 2023/6/27
Updated in MMDB: 2024/07
Experimental Method:
x-ray diffraction
Resolution: 2.92  Å
Similar Structures:
Biological Unit for 8JUR: trimeric; determined by author and by software (PISA)
Molecular Components in 8JUR
Label Count Molecule
Proteins (3 molecules)
3
Chitoporin
Molecule annotation
Chemicals and Non-standard biopolymers (12 molecules)
1
3
(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
2
8
SODIUM IONSODIUM ION
3
1
(2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDR OXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL(2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDR OXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303