8JTD: BJOX2000.664 trimer in complex with Fab fragment of broadly neutralizing HIV antibody PGT145

PDB ID: 8JTDDownload
MMDB ID: 237175
PDB Deposition Date: 2023/6/21
Updated in MMDB: 2023/10
Experimental Method:
electron microscopy
Resolution: 4.9  Å
Source Organism:
Human immunodeficiency virus 1▼
Similar Structures:
Biological Unit for 8JTD: octameric; determined by author and by software
Molecular Components in 8JTD
Label Count Molecule
Proteins (8 molecules)
3
Gp120 Protein of HIV Envelope Trimer
Molecule annotation
3
Gp41 Protein of HIV Envelope Trimer
Molecule annotation
1
Pgt145 Antibody Fragment, Heavy Chain
Molecule annotation
1
Pgt145 Antibody Fragment, Light Chain
Molecule annotation
Chemicals and Non-standard biopolymers (128 molecules)
1
94
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
12
beta-D-mannopyranosebeta-D-mannopyranose
3
22
alpha-D-mannopyranosealpha-D-mannopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303