8JCN: The crystal structure of SARS-CoV-2 main protease in complex with Compound 58

PDB ID: 8JCNDownload
MMDB ID: 246919
PDB Deposition Date: 2023/5/11
Updated in MMDB: 2025/06
Experimental Method:
x-ray diffraction
Resolution: 1.61  Å
Source Organism:
Similar Structures:
Biological Unit for 8JCN: dimeric; determined by author and by software (PISA)
Molecular Components in 8JCN
Label Count Molecule
Proteins (2 molecules)
2
3c-like Proteinase Nsp5
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
2
1-[3-(diphenoxyphosphorylamino)phenyl]ethanone1-[3-(diphenoxyphosphorylamino)phenyl]ethanone
2
2
GLYCEROLGLYCEROL
3
2
DIMETHYL SULFOXIDEDIMETHYL SULFOXIDE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303