8JAP: Cryo-EM structure of SARS-CoV-2 WT RBD in complex with W328-6H2 (local refinement)

PDB ID: 8JAPDownload
MMDB ID: 256854
PDB Deposition Date: 2023/5/6
Updated in MMDB: 2025/12
Experimental Method:
electron microscopy
Resolution: 3.81  Å
Source Organism:
Severe acute respiratory syndrome coronavirus 2▼
Similar Structures:
Biological Unit for 8JAP: trimeric; determined by author and by software
Molecular Components in 8JAP
Label Count Molecule
Proteins (3 molecules)
1
Spike Glycoprotein
Molecule annotation
1
H Chain of W328-6h2 FAB Region
Molecule annotation
1
L Chain of W328-6h2 FAB Region
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
2
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303