8J8J: Membrane bound PRTase, C3 symmetry, donor bound

PDB ID: 8J8JDownload
MMDB ID: 242307
PDB Deposition Date: 2023/5/1
Updated in MMDB: 2025/08
Experimental Method:
electron microscopy
Resolution: 2.76  Å
Source Organism:
Similar Structures:
Biological Unit for 8J8J: trimeric; determined by author
Molecular Components in 8J8J
Label Count Molecule
Proteins (3 molecules)
3
Decaprenyl-phosphate Phosphoribosyltransferase
(Gene symbol: ubiA)
Molecule annotation
Chemicals and Non-standard biopolymers (9 molecules)
1
3
1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose
2
3
MAGNESIUM IONMAGNESIUM ION
3
3
(1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate(1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303