8J8F: Monkeypox virus DNA replication holoenzyme F8, A22 and E4 in complex with a DNA duplex and dCTP

PDB ID: 8J8FDownload
MMDB ID: 246384
PDB Deposition Date: 2023/5/1
Updated in MMDB: 2025/07
Experimental Method:
electron microscopy
Resolution: 2.98  Å
Source Organism:
DNA molecule▼
Similar Structures:
Biological Unit for 8J8F: pentameric; determined by author and by software
Molecular Components in 8J8F
Label Count Molecule
Proteins (3 molecules)
1
DNA Polymerase
Molecule annotation
1
E4R
Molecule annotation
1
DNA Polymerase Processivity Factor Component A20
Molecule annotation
Nucleotides(2 molecules)
1
DNA (5'-d(p*ap*gp*cp*tp*gp*cp*tp*ap*tp*gp*ap*gp*ap*tp*tp*ap*ap*gp*tp*tp*ap*t)-3')
Molecule annotation
1
DNA (5'-d(p*gp*tp*tp*tp*tp*tp*tp*tp*tp*tp*tp*tp*tp*gp*ap*tp*ap*ap*cp*tp*tp*ap*ap*tp*cp*tp*cp*ap*cp*ap*tp*ap*gp*cp*ap*gp*cp*t)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (4 molecules)
1
1
2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE
2
3
CALCIUM IONCALCIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303