8IUJ: Cryo-EM structure of Euglena gracilis super-complex III2+IV2, composite

PDB ID: 8IUJDownload
MMDB ID: 243274
PDB Deposition Date: 2023/3/24
Updated in MMDB: 2024/03
Experimental Method:
electron microscopy
Resolution: 3.06  Å
Source Organism:
Similar Structures:
Biological Unit for 8IUJ: 60-meric; determined by author
Molecular Components in 8IUJ
Label Count Molecule
Proteins (60 molecules)
2
Mpp-beta
Molecule annotation
2
Cytochrome B
Molecule annotation
2
Cytochrome C1, Heme Protein
Molecule annotation
2
Uqcrq
Molecule annotation
2
Uqcr10
Molecule annotation
2
Ubiquinol-cytochrome-c Reductase Complex Subunit IX, Mitochondrial
Molecule annotation
2
Coxeg1
Molecule annotation
2
Coxeg3
Molecule annotation
2
Coxeg5
Molecule annotation
2
Coxeg8
Molecule annotation
2
Coxeg10
Molecule annotation
2
Cox5c
Molecule annotation
2
Cox6a
Molecule annotation
2
Cox6b-1
Molecule annotation
2
Cox7c
Molecule annotation
2
Cytochrome C Oxidase Subunit 1
Molecule annotation
2
Cytochrome C Oxidase Subunit 2
Molecule annotation
2
Putative Nadh Dehydrogenase Subunit 6
Molecule annotation
2
Cox4
Molecule annotation
2
Uqcrfs1
Molecule annotation
2
Uqcrh
Molecule annotation
2
Uqcrb
Molecule annotation
2
Uqcr9
Molecule annotation
2
Ubiquinol-cytochrome-c Reductase Complex Core Protein 2, Mitochondrial
Molecule annotation
2
Cox5b-2
Molecule annotation
2
Coxeg4
Molecule annotation
2
Coxeg6
Molecule annotation
2
Coxeg7
Molecule annotation
2
Coxeg9
Molecule annotation
2
Cox7a
Molecule annotation
Chemicals and Non-standard biopolymers (75 molecules)
1
4
PROTOPORPHYRIN IX CONTAINING FEPROTOPORPHYRIN IX CONTAINING FE
2
15
CARDIOLIPINCARDIOLIPIN
3
2
HEME CHEME C
4
22
1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
5
3
1,2-DILAUROYL-SN-GLYCERO-3-PHOSPHATE1,2-DILAUROYL-SN-GLYCERO-3-PHOSPHATE
6
11
1,2-Distearoyl-sn-glycerophosphoethanolamine1,2-Distearoyl-sn-glycerophosphoethanolamine
7
4
HEME-AHEME-A
8
6
COPPER (II) IONCOPPER (II) ION
9
2
MAGNESIUM IONMAGNESIUM ION
10
2
FE2/S2 (INORGANIC) CLUSTERFE2/S2 (INORGANIC) CLUSTER
11
2
ZINC IONZINC ION
12
2
O-[(S)-hydroxy{[(2S)-2-hydroxy-3-(octadec-9-enoyloxy)propyl]oxy}phosphoryl]-L-serineO-[(S)-hydroxy{[(2S)-2-hydroxy-3-(octadec-9-enoyloxy)propyl]oxy}phosphoryl]-L-serine
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303