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8IOT:
Structure of the SARS-CoV-2 XBB.1 spike glycoprotein (closed-2 state)
PDB ID:
8IOT
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MMDB ID:
230633
PDB Deposition Date:
2023/3/13
Updated in MMDB:
2024/11
Experimental Method:
electron microscopy
Resolution:
2.51 Å
Source Organism:
Severe acute respiratory syndrome coronavirus 2
Similar Structures:
VAST+
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Biological Unit for 8IOT: trimeric; determined by author
Molecular Components in 8IOT
Label
Count
Molecule
Proteins (3 molecules)
A
B
C
3
Spike Glycoprotein
Chemicals and Non-standard biopolymers (48 molecules)
1
48
2-acetamido-2-deoxy-beta-D-glucopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303