8ILF: The crystal structure of dGTPalphaSe-Sp:DNApre-II:Pol X substrate ternary complex

PDB ID: 8ILFDownload
MMDB ID: 241340
PDB Deposition Date: 2023/3/3
Updated in MMDB: 2024/01
Experimental Method:
x-ray diffraction
Resolution: 2.3  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 8ILF: hexameric; determined by author
Molecular Components in 8ILF
Label Count Molecule
Proteins (2 molecules)
2
Repair DNA Polymerase X
Molecule annotation
Nucleotides(4 molecules)
4
DNA (5'-d(*cp*tp*gp*gp*ap*tp*cp*cp*a)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (4 molecules)
1
2
MANGANESE (II) IONMANGANESE (II) ION
2
2
[[(2R,3S,5R)-5-(2-azanyl-6-oxidanylidene-1H-purin-9-yl)-3-oxidanyl-oxolan-2-yl]methoxy-selanyl-phosphoryl] phosphono hydrogen phosphate[[(2R,3S,5R)-5-(2-azanyl-6-oxidanylidene-1H-purin-9-yl)-3-oxidanyl-oxolan-2-yl]methoxy-selanyl-phosphoryl] phosphono hydrogen phosphate
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303