8IC1: endo-alpha-D-arabinanase EndoMA1 D51N mutant from Microbacterium arabinogalactanolyticum in complex with arabinooligosaccharides

PDB ID: 8IC1Download
MMDB ID: 234262
PDB Deposition Date: 2023/2/10
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 1.8  Å
Source Organism:
Similar Structures:
Biological Unit for 8IC1: dimeric; determined by author and by software (PISA)
Molecular Components in 8IC1
Label Count Molecule
Proteins (2 molecules)
2
Endo-alpha-d-arabinanase
Molecule annotation
Chemicals and Non-standard biopolymers (33 molecules)
1
12
alpha-D-arabinofuranosealpha-D-arabinofuranose
2
8
GLYCEROLGLYCEROL
3
3
TRIETHYLENE GLYCOLTRIETHYLENE GLYCOL
4
3
DI(HYDROXYETHYL)ETHERDI(HYDROXYETHYL)ETHER
5
2
SODIUM IONSODIUM ION
6
2
CALCIUM IONCALCIUM ION
7
2
(3~{a}~{S},5~{R},6~{R},6~{a}~{S})-5-(hydroxymethyl)-2,2-dimethyl-3~{a},5,6,6~{a}-tetrahydrofuro[2,3-d][1,3]dioxol-6-ol(3~{a}~{S},5~{R},6~{R},6~{a}~{S})-5-(hydroxymethyl)-2,2-dimethyl-3~{a},5,6,6~{a}-tetrahydrofuro[2,3-d][1,3]dioxol-6-ol
8
1
2-(N-MORPHOLINO)-ETHANESULFONIC ACID2-(N-MORPHOLINO)-ETHANESULFONIC ACID
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303