8I8F: Crystal structure of NDM-1 at pH5.5 (Succinate) in complex with hydrolyzed compound 1

PDB ID: 8I8FDownload
MMDB ID: 242275
PDB Deposition Date: 2023/2/4
Updated in MMDB: 2024/03
Experimental Method:
x-ray diffraction
Resolution: 1.89  Å
Source Organism:
Similar Structures:
Biological Unit for 8I8F: dimeric; determined by author
Molecular Components in 8I8F
Label Count Molecule
Proteins (2 molecules)
2
Metallo Beta Lactamase Ndm-1
(Gene symbol: blaNDM-1)
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
4
ZINC IONZINC ION
2
2
(2R,4S)-5,5-dimethyl-2-[(1R)-1-(2-naphthalen-1-yloxyethanoylamino)-2-oxidanyl-2-oxidanylidene-ethyl]-1,3-thiazolidine-4-carboxylic acid(2R,4S)-5,5-dimethyl-2-[(1R)-1-(2-naphthalen-1-yloxyethanoylamino)-2-oxidanyl-2-oxidanylidene-ethyl]-1,3-thiazolidine-4-carboxylic acid
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303