8HZD: A new fluorescent RNA aptamer bound with N618

PDB ID: 8HZDDownload
MMDB ID: 248409
PDB Deposition Date: 2023/1/9
Updated in MMDB: 2024/06
Experimental Method:
x-ray diffraction
Resolution: 1.87  Å
Source Organism:
Biological Unit for 8HZD: dimeric; determined by author and by software (PISA)
Molecular Components in 8HZD
Label Count Molecule
Nucleotides(2 molecules)
1
RNA (36-mer)
Molecule annotation
1
RNA (36-mer)
Molecule annotation
Chemicals and Non-standard biopolymers (9 molecules)
1
7
MAGNESIUM IONMAGNESIUM ION
2
2
4-[(~{E})-2-[(4~{Z})-4-[[3,5-bis(fluoranyl)-4-oxidanyl-phenyl]methylidene]-1-methyl-5-oxidanylidene-imidazol-2-yl]ethenyl]benzenecarbonitrile4-[(~{E})-2-[(4~{Z})-4-[[3,5-bis(fluoranyl)-4-oxidanyl-phenyl]methylidene]-1-methyl-5-oxidanylidene-imidazol-2-yl]ethenyl]benzenecarbonitrile
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303