8HWB: D5 ATP-ADP-Apo-ssDNA IS2

PDB ID: 8HWBDownload
MMDB ID: 241012
PDB Deposition Date: 2022/12/29
Updated in MMDB: 2024/02
Experimental Method:
electron microscopy
Resolution: 3.9  Å
Source Organism:
Similar Structures:
Biological Unit for 8HWB: octameric; determined by author
Molecular Components in 8HWB
Label Count Molecule
Proteins (7 molecules)
7
Primase D5
Molecule annotation
Nucleotide(1 molecule)
1
DNA (5'-d(p*tp*tp*tp*tp*tp*t)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (10 molecules)
1
5
ADENOSINE-5'-TRIPHOSPHATEADENOSINE-5'-TRIPHOSPHATE
2
4
MAGNESIUM IONMAGNESIUM ION
3
1
ADENOSINE-5'-DIPHOSPHATEADENOSINE-5'-DIPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303