8HIL: A cryo-EM structure of B. oleracea RNA polymerase V at 3.57 Angstrom

PDB ID: 8HILDownload
MMDB ID: 228177
PDB Deposition Date: 2022/11/20
Updated in MMDB: 2024/07
Experimental Method:
electron microscopy
Resolution: 3.57  Å
Source Organism:
Similar Structures:
Biological Unit for 8HIL: decameric; determined by author
Molecular Components in 8HIL
Label Count Molecule
Proteins (10 molecules)
1
DNA-directed RNA Polymerase V Largest Subunit
Molecule annotation
1
DNA-dependent RNA Polymerase IV and V Subunit 2
Molecule annotation
1
Rpold Domain-containing Protein
Molecule annotation
1
DNA-directed RNA Polymerases I, II, and III Subunit Rpabc1
Molecule annotation
1
DNA-directed RNA Polymerases I, II, and III Subunit Rpabc2
Molecule annotation
1
DNA-directed RNA Polymerases I, II, and III Subunit Rpabc3
Molecule annotation
1
DNA-directed RNA Polymerase Subunit
Molecule annotation
1
DNA-directed RNA Polymerases I, II, and III Subunit Rpabc5
Molecule annotation
1
RNA_pol_l_2 Domain-containing Protein
Molecule annotation
1
DNA-directed RNA Polymerases II, IV and V Subunit 12
Molecule annotation
Chemicals and Non-standard biopolymers (7 molecules)
1
6
ZINC IONZINC ION
2
1
MAGNESIUM IONMAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303