8H2U: X-ray Structure of photosystem I-LHCI super complex from Chlamydomonas reinhardtii

PDB ID: 8H2UDownload
MMDB ID: 231721
PDB Deposition Date: 2022/10/7
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 3.4  Å
Source Organism:
Similar Structures:
Biological Unit for 8H2U: eicosameric; determined by author
Molecular Components in 8H2U
Label Count Molecule
Proteins (20 molecules)
1
Photosystem I P700 Chlorophyll a Apoprotein A1
(Gene symbol: psaA)
Molecule annotation
1
Photosystem I P700 Chlorophyll a Apoprotein A2
(Gene symbol: psaB)
Molecule annotation
1
Photosystem I Iron-sulfur Center
(Gene symbol: psaC)
Molecule annotation
1
Photosystem I Reaction Center Subunit II, Chloroplastic
(Gene symbol: PSAD)
Molecule annotation
1
Photosystem I Reaction Center Subunit IV, Chloroplastic
(Gene symbol: PSAE)
Molecule annotation
1
Photosystem I Reaction Center Subunit Iii, Chloroplastic
(Gene symbol: PSAF)
Molecule annotation
1
Photosystem I Reaction Center Subunit V, Chloroplastic
(Gene symbol: PSAG)
Molecule annotation
1
Photosystem I Reaction Center Subunit VI, Chloroplastic
(Gene symbol: PSAH)
Molecule annotation
1
Photosystem I Reaction Center Subunit Viii
Molecule annotation
1
Photosystem I Reaction Center Subunit IX
(Gene symbol: psaJ)
Molecule annotation
1
Photosystem I Reaction Center Subunit Psak, Chloroplastic
(Gene symbol: PSAK)
Molecule annotation
1
PSI Subunit V
Molecule annotation
2
Chlorophyll A-B Binding Protein, Chloroplastic
Molecule annotation
1
Chlorophyll A-B Binding Protein, Chloroplastic
Molecule annotation
1
Chlorophyll A-B Binding Protein, Chloroplastic
Molecule annotation
1
Lhca3
Molecule annotation
1
Chlorophyll A-B Binding Protein, Chloroplastic
Molecule annotation
1
Chlorophyll A-B Binding Protein, Chloroplastic
Molecule annotation
1
Chlorophyll A-B Binding Protein, Chloroplastic
Molecule annotation
Chemicals and Non-standard biopolymers (278 molecules)
1
185
CHLOROPHYLL ACHLOROPHYLL A
2
3
IRON/SULFUR CLUSTERIRON/SULFUR CLUSTER
3
2
PHYLLOQUINONEPHYLLOQUINONE
4
7
1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
5
27
BETA-CAROTENEBETA-CAROTENE
6
2
DIGALACTOSYL DIACYL GLYCEROL (DGDG)DIGALACTOSYL DIACYL GLYCEROL (DGDG)
7
2
DODECYL-BETA-D-MALTOSIDEDODECYL-BETA-D-MALTOSIDE
8
7
1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
9
12
(3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
10
26
CHLOROPHYLL BCHLOROPHYLL B
11
5
(3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303