8GWM: SARS-CoV-2 E-RTC bound with MMP-nsp9 and GMPPNP

PDB ID: 8GWMDownload
MMDB ID: 243237
PDB Deposition Date: 2022/9/17
Updated in MMDB: 2025/06
Experimental Method:
electron microscopy
Resolution: 2.64  Å
Source Organism:
Similar Structures:
Biological Unit for 8GWM: nonameric; determined by author
Molecular Components in 8GWM
Label Count Molecule
Proteins (7 molecules)
1
RNA-directed RNA Polymerase
Molecule annotation
2
Non-structural Protein 8
Molecule annotation
1
Non-structural Protein 7
Molecule annotation
2
Helicase
Molecule annotation
1
Non-structural Protein 9
Molecule annotation
Nucleotides(2 molecules)
1
RNA (25-mer)
Molecule annotation
1
RNA (26-mer)
Molecule annotation
Chemicals and Non-standard biopolymers (10 molecules)
1
8
ZINC IONZINC ION
2
1
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTERPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
3
1
2'-deoxy-2'-fluoro-2'-methyluridine 5'-(trihydrogen diphosphate)2'-deoxy-2'-fluoro-2'-methyluridine 5'-(trihydrogen diphosphate)
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303