8GWK: SARS-CoV-2 RNA E-RTC complex with RMP-nsp9 and GMPPNP

PDB ID: 8GWKDownload
MMDB ID: 243236
PDB Deposition Date: 2022/9/17
Updated in MMDB: 2025/07
Experimental Method:
electron microscopy
Resolution: 2.72  Å
Source Organism:
Similar Structures:
Biological Unit for 8GWK: nonameric; determined by author
Molecular Components in 8GWK
Label Count Molecule
Proteins (7 molecules)
1
RNA-directed RNA Polymerase
Molecule annotation
2
Non-structural Protein 8
Molecule annotation
1
Non-structural Protein 7
Molecule annotation
2
Helicase
Molecule annotation
1
Non-structural Protein 9
Molecule annotation
Nucleotides(2 molecules)
1
Primer
Molecule annotation
1
Template
Molecule annotation
Chemicals and Non-standard biopolymers (11 molecules)
1
8
ZINC IONZINC ION
2
1
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTERPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
3
1
MAGNESIUM IONMAGNESIUM ION
4
1
[(2~{R},3~{S},4~{R},5~{R})-5-(4-azanylpyrrolo[2,1-f][1,2,4]triazin-7-yl)-5-cyano-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate[(2~{R},3~{S},4~{R},5~{R})-5-(4-azanylpyrrolo[2,1-f][1,2,4]triazin-7-yl)-5-cyano-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303