8GRY: Cryo-EM structure of SARS-CoV-2 Omicron BA.2 RBD in complex with rat ACE2 (local refinement)

PDB ID: 8GRYDownload
MMDB ID: 233074
PDB Deposition Date: 2022/9/3
Updated in MMDB: 2024/10
Experimental Method:
electron microscopy
Resolution: 3.29  Å
Source Organism:
Severe acute respiratory syndrome coronavirus 2▼
Similar Structures:
Biological Unit for 8GRY: dimeric; determined by author
Molecular Components in 8GRY
Label Count Molecule
Proteins (2 molecules)
1
Processed Angiotensin-converting Enzyme 2
Molecule annotation
1
Spike Protein S1
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
1
ZINC IONZINC ION
2
1
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303