8GPC: Crystal structure of NDM-1 at pH5.5 (Succinate) in complex with hydrolyzed ampicillin

PDB ID: 8GPCDownload
MMDB ID: 234797
PDB Deposition Date: 2022/8/26
Updated in MMDB: 2023/09
Experimental Method:
x-ray diffraction
Resolution: 1.4  Å
Source Organism:
Similar Structures:
Biological Unit for 8GPC: monomeric; determined by author and by software (PISA)
Molecular Components in 8GPC
Label Count Molecule
Protein (1 molecule)
1
Metallo Beta Lactamase Ndm-1
(Gene symbol: blaNDM-1)
Molecule annotation
Chemicals and Non-standard biopolymers (5 molecules)
1
2
ZINC IONZINC ION
2
2
(2R,4S)-2-[(R)-{[(2R)-2-amino-2-phenylacetyl]amino}(carboxy)methyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid(2R,4S)-2-[(R)-{[(2R)-2-amino-2-phenylacetyl]amino}(carboxy)methyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid
3
1
SODIUM IONSODIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303