8GDR: SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 002-S21B10

PDB ID: 8GDRDownload
MMDB ID: 243919
PDB Deposition Date: 2023/3/6
Updated in MMDB: 2024/03
Experimental Method:
electron microscopy
Resolution: 3.6  Å
Source Organism:
Severe acute respiratory syndrome coronavirus 2▼
Similar Structures:
Biological Unit for 8GDR: heptameric; determined by author
Molecular Components in 8GDR
Label Count Molecule
Proteins (7 molecules)
3
Spike Glycoprotein
Molecule annotation
2
Monoclonal Antibody 002-s21b10 Heavy Chain Variable Domain
Molecule annotation
2
Monoclonal Antibody 002-s21b10 Light Chain Variable Domain
Molecule annotation
Chemicals and Non-standard biopolymers (36 molecules)
1
36
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303