8GD4: Crystal Structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with DMFO Inhibitor 6

PDB ID: 8GD4Download
MMDB ID: 236405
PDB Deposition Date: 2023/3/3
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 2  Å
Source Organism:
Similar Structures:
Biological Unit for 8GD4: monomeric; determined by author and by software (PISA)
Molecular Components in 8GD4
Label Count Molecule
Protein (1 molecule)
1
Hdac6 Protein
(Gene symbol: hdac6)
Molecule annotation
Chemicals and Non-standard biopolymers (4 molecules)
1
1
2-(benzylamino)-N'-(difluoroacetyl)pyrimidine-5-carbohydrazide2-(benzylamino)-N'-(difluoroacetyl)pyrimidine-5-carbohydrazide
2
1
ZINC IONZINC ION
3
2
POTASSIUM IONPOTASSIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303