8GA8: Structure of the yeast (HDAC) Rpd3L complex

PDB ID: 8GA8Download
MMDB ID: 232840
PDB Deposition Date: 2023/2/22
Updated in MMDB: 2023/07
Experimental Method:
electron microscopy
Resolution: 3.5  Å
Source Organism:
Similar Structures:
Biological Unit for 8GA8: decameric; determined by author
Molecular Components in 8GA8
Label Count Molecule
Proteins (10 molecules)
1
Transcriptional Regulatory Protein Sds3
(Gene symbol: SDS3)
Molecule annotation
2
Transcriptional Regulatory Protein Sin3
(Gene symbol: SIN3)
Molecule annotation
1
Transcriptional Regulatory Protein Sap30
(Gene symbol: SAP30)
Molecule annotation
1
Transcriptional Regulatory Protein Pho23
(Gene symbol: PHO23)
Molecule annotation
1
Transcriptional Regulatory Protein Rxt2
(Gene symbol: RXT2)
Molecule annotation
1
Transcriptional Regulatory Protein Dep1
(Gene symbol: DEP1)
Molecule annotation
2
Histone Deacetylase Rpd3
(Gene symbol: RPD3)
Molecule annotation
1
Transcriptional Regulatory Protein Rxt3
(Gene symbol: RXT3)
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
2
ZINC IONZINC ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303