8G9Y: Cryo-EM structure of vFP49.02 Fab in complex with HIV-1 Env BG505 DS-SOSIP.664 (conformation 3)

PDB ID: 8G9YDownload
MMDB ID: 229276
PDB Deposition Date: 2023/2/22
Updated in MMDB: 2024/12
Experimental Method:
electron microscopy
Resolution: 4.28  Å
Source Organism:
Human immunodeficiency virus 1▼
Similar Structures:
Biological Unit for 8G9Y: octameric; determined by author
Molecular Components in 8G9Y
Label Count Molecule
Proteins (8 molecules)
3
Envelope Glycoprotein Gp41
Molecule annotation
3
Envelope Glycoprotein Gp120
Molecule annotation
1
Vfp49.02 Heavy Chain
Molecule annotation
1
Vfp49.02 Light Chain
Molecule annotation
Chemicals and Non-standard biopolymers (120 molecules)
1
93
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
18
beta-D-mannopyranosebeta-D-mannopyranose
3
9
alpha-D-mannopyranosealpha-D-mannopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303