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8G86:
Human Oct4 bound to nucleosome with human nMatn1 sequence (focused refinement of nucleosome)
PDB ID:
8G86
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MMDB ID:
228151
PDB Deposition Date:
2023/2/17
Updated in MMDB:
2023/07
Experimental Method:
electron microscopy
Resolution:
2.3 Å
Source Organism:
Xenopus laevis laevis
▼
Taxonomy
Molecule
Xenopus laevis laevis
B, F
Homo sapiens
I, J
Xenopus laevis
A, C, D, E, G, H
Similar Structures:
VAST+
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Molecular Components in 8G86
Label
Count
Molecule
Proteins (8 molecules)
A
E
2
Histone H3
B
F
2
Histone H4
C
G
2
Histone H2A
D
H
2
Histone H2B
Nucleotides(2 molecules)
I
1
Nmatn1 DNA (Top Stand)
J
1
Nmatn1 DNA (Bottom Strand)
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303