8FXB: SARS-CoV-2 XBB.1 spike RBD bound to the human ACE2 ectodomain and the S309 neutralizing antibody Fab fragment

PDB ID: 8FXBDownload
MMDB ID: 236396
PDB Deposition Date: 2023/1/24
Updated in MMDB: 2023/10
Experimental Method:
electron microscopy
Resolution: 3.1  Å
Source Organism:
Severe acute respiratory syndrome coronavirus▼
Similar Structures:
Biological Unit for 8FXB: tetrameric; determined by author
Molecular Components in 8FXB
Label Count Molecule
Proteins (4 molecules)
1
S309 Light Chain
Molecule annotation
1
S309 Heavy Chain
Molecule annotation
1
Processed Angiotensin-converting Enzyme 2
Molecule annotation
1
Spike Protein S1
Molecule annotation
Chemicals and Non-standard biopolymers (7 molecules)
1
6
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
alpha-L-fucopyranosealpha-L-fucopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303