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8FIX:
Cryo-EM structure of E. coli RNA polymerase backtracked elongation complex harboring a terminal mismatch
PDB ID:
8FIX
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MMDB ID:
228485
PDB Deposition Date:
2022/12/17
Updated in MMDB:
2024/06
Experimental Method:
electron microscopy
Resolution:
3.9 Å
Source Organism:
Escherichia phage Lambda
▼
Taxonomy
Molecule
Escherichia phage Lambda
N, T, R
Escherichia coli K-12
A, B, C, D, E
Similar Structures:
VAST+
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Biological Unit for 8FIX: octameric; determined by author
Molecular Components in 8FIX
Label
Count
Molecule
Proteins (5 molecules)
A
B
2
DNA-directed RNA Polymerase Subunit Alpha
C
1
DNA-directed RNA Polymerase Subunit Beta
D
1
DNA-directed RNA Polymerase Subunit Beta'
E
1
DNA-directed RNA Polymerase Subunit Omega
Nucleotides(3 molecules)
N
1
Non-template DNA
T
1
Template DNA
R
1
RNA
Chemicals and Non-standard biopolymers (3 molecules)
1
2
ZINC ION
2
1
MAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303