8FIM: Structure of APOBEC3A (E72A inactive mutant) in complex with TTC-hairpin DNA substrate

PDB ID: 8FIMDownload
MMDB ID: 235137
PDB Deposition Date: 2022/12/16
Updated in MMDB: 2024/09
Experimental Method:
x-ray diffraction
Resolution: 2.22  Å
Source Organism:
Similar Structures:
Biological Unit for 8FIM: dimeric; determined by author and by software (PISA)
Molecular Components in 8FIM
Label Count Molecule
Protein (1 molecule)
1
DNA Dc->du-editing Enzyme Apobec-3a
(Gene symbol: APOBEC3A)
Molecule annotation
Nucleotide(1 molecule)
1
DNA (5'-d(*tp*gp*cp*gp*cp*tp*tp*cp*gp*cp*gp*cp*t)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (4 molecules)
1
1
INOSITOL HEXAKISPHOSPHATEINOSITOL HEXAKISPHOSPHATE
2
1
ZINC IONZINC ION
3
1
CHLORIDE IONCHLORIDE ION
4
1
PHOSPHATE IONPHOSPHATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303