8F9M: HIV Env germline targeting BG505_MD64_N332-GT5 SOSIP in complex with V3-glycan polyclonal Fab isolated from immunized wild type mice, and NHP monoclonal Fab RM20A3

PDB ID: 8F9MDownload
MMDB ID: 246881
PDB Deposition Date: 2022/11/23
Updated in MMDB: 2024/06
Experimental Method:
electron microscopy
Resolution: 4.1  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 8F9M: 14-meric; determined by author
Molecular Components in 8F9M
Label Count Molecule
Proteins (14 molecules)
3
Bg505_md64_n332-gt5 Gp120
Molecule annotation
3
Rm20a3 FAB Heavy Chain
Molecule annotation
3
Rm20a3 FAB Light Chain
Molecule annotation
3
Bg505_md64_n332-gt5 Gp41
Molecule annotation
1
V3-glycan Epitope Polyclonal FAB Heavy Chain
Molecule annotation
1
V3-glycan Epitope Polyclonal FAB Light Chain
Molecule annotation
Chemicals and Non-standard biopolymers (64 molecules)
1
60
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
2
beta-D-mannopyranosebeta-D-mannopyranose
3
2
alpha-D-mannopyranosealpha-D-mannopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303