8F6M: Complex of Rabbit muscle pyruvate kinase with ADP and the phosphonate analogue of PEP mimicking the Michaelis complex

PDB ID: 8F6MDownload
MMDB ID: 230559
PDB Deposition Date: 2022/11/16
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 2.15  Å
Source Organism:
Similar Structures:
Biological Unit for 8F6M: tetrameric; determined by author and by software (PISA)
Molecular Components in 8F6M
Label Count Molecule
Proteins (4 molecules)
4
Pyruvate Kinase PKM
Molecule annotation
Chemicals and Non-standard biopolymers (38 molecules)
1
2
ADENOSINE-5'-DIPHOSPHATEADENOSINE-5'-DIPHOSPHATE
2
5
SUCCINIC ACIDSUCCINIC ACID
3
7
MANGANESE (II) IONMANGANESE (II) ION
4
4
POTASSIUM IONPOTASSIUM ION
5
4
ALANINEALANINE
6
13
GLYCEROLGLYCEROL
7
3
(E)-2-METHYL-3-PHOSPHONOACRYLATE(E)-2-METHYL-3-PHOSPHONOACRYLATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303