8F4P: SARS-CoV-2 spike protein trimer (down conformation) bound with a nanobody

PDB ID: 8F4PDownload
MMDB ID: 238442
PDB Deposition Date: 2022/11/11
Updated in MMDB: 2023/11
Experimental Method:
electron microscopy
Resolution: 3.7  Å
Source Organism:
Severe acute respiratory syndrome coronavirus 2▼
Similar Structures:
Biological Unit for 8F4P: tetrameric; determined by author
Molecular Components in 8F4P
Label Count Molecule
Proteins (4 molecules)
3
Spike Glycoprotein
Molecule annotation
1
Anti-s1 Nanobody
Molecule annotation
Chemicals and Non-standard biopolymers (37 molecules)
1
37
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303