8F1J: SigN RNA polymerase early-melted intermediate bound to mismatch DNA fragment dhsU36mm2 (-12A)

PDB ID: 8F1JDownload
MMDB ID: 228734
PDB Deposition Date: 2022/11/5
Updated in MMDB: 2024/06
Experimental Method:
electron microscopy
Resolution: 2.6  Å
Source Organism:
Aquifex aeolicus▼
Similar Structures:
Biological Unit for 8F1J: decameric; determined by author
Molecular Components in 8F1J
Label Count Molecule
Proteins (6 molecules)
2
DNA-directed RNA Polymerase Subunit Alpha
Molecule annotation
1
DNA-directed RNA Polymerase Subunit Beta
Molecule annotation
1
DNA-directed RNA Polymerase Subunit Beta'
Molecule annotation
1
DNA-directed RNA Polymerase Subunit Omega
Molecule annotation
1
RNA Polymerase Sigma-54 Factor
Molecule annotation
Nucleotides(4 molecules)
2
DNA (36-mer)
Molecule annotation
2
DNA (36-mer)
Molecule annotation
Chemicals and Non-standard biopolymers (3 molecules)
1
1
MAGNESIUM IONMAGNESIUM ION
2
2
ZINC IONZINC ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303