8EPP: Cryo-EM structure of SARS-CoV-2 Spike trimer S2D14 with two RBDs in the open conformation

PDB ID: 8EPPDownload
MMDB ID: 231893
PDB Deposition Date: 2022/10/6
Updated in MMDB: 2025/06
Experimental Method:
electron microscopy
Resolution: 3.1  Å
Source Organism:
Similar Structures:
Biological Unit for 8EPP: trimeric; determined by author
Molecular Components in 8EPP
Label Count Molecule
Proteins (3 molecules)
3
Spike Glycoprotein
Molecule annotation
Chemicals and Non-standard biopolymers (66 molecules)
1
54
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
6
beta-D-mannopyranosebeta-D-mannopyranose
3
6
alpha-D-mannopyranosealpha-D-mannopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303