8EDG: Cryo-EM structure of the Hermes transposase bound to two left-ends of its DNA transposon

PDB ID: 8EDGDownload
MMDB ID: 233580
PDB Deposition Date: 2022/9/4
Updated in MMDB: 2023/08
Experimental Method:
electron microscopy
Resolution: 4.64  Å
Source Organism:
Similar Structures:
Biological Unit for 8EDG: dodecameric; determined by author
Molecular Components in 8EDG
Label Count Molecule
Proteins (6 molecules)
6
Hermes Transposase
Molecule annotation
Nucleotides(6 molecules)
2
DNA (5'-d(*gp*cp*gp*tp*gp*ap*a)-3')
Molecule annotation
2
DNA (46-mer)
Molecule annotation
2
DNA (55-mer)
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
6
ZINC IONZINC ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303