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8ED4:
Structure of the complex between the arsenite oxidase and its native electron acceptor cytochrome c552 from Pseudorhizobium sp. str. NT-26
PDB ID:
8ED4
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MMDB ID:
228982
PDB Deposition Date:
2022/9/3
Updated in MMDB:
2024/10
Experimental Method:
x-ray diffraction
Resolution:
2.25 Å
Source Organism:
Pseudorhizobium banfieldiae
Similar Structures:
VAST+
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Biological Unit for 8ED4: hexameric; determined by author
Molecular Components in 8ED4
Label
Count
Molecule
Proteins (6 molecules)
A
C
2
Aroa
B
D
2
Arob
I
J
2
C-type Cytochrome C552
Chemicals and Non-standard biopolymers (14 molecules)
1
4
2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE
2
2
MOLYBDENUM(IV) ION
3
2
FE3-S4 CLUSTER
4
2
OXYGEN ATOM
5
2
FE2/S2 (INORGANIC) CLUSTER
6
2
PROTOPORPHYRIN IX CONTAINING FE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303