8EB3: Crystal structure of glutamate racemase from Helicobacter pylori in complex with a fragment

PDB ID: 8EB3Download
MMDB ID: 235409
PDB Deposition Date: 2022/8/30
Updated in MMDB: 2023/09
Experimental Method:
x-ray diffraction
Resolution: 2.2  Å
Source Organism:
Similar Structures:
Biological Unit for 8EB3: dimeric; determined by author and by software (PISA)
Molecular Components in 8EB3
Label Count Molecule
Proteins (2 molecules)
2
Glutamate Racemase
Molecule annotation
Chemicals and Non-standard biopolymers (9 molecules)
1
2
GLYCEROLGLYCEROL
2
2
DIMETHYL SULFOXIDEDIMETHYL SULFOXIDE
3
2
1-[4-methyl-2-(pyridin-4-yl)-1,3-thiazol-5-yl]methanamine1-[4-methyl-2-(pyridin-4-yl)-1,3-thiazol-5-yl]methanamine
4
2
D-GLUTAMIC ACIDD-GLUTAMIC ACID
5
1
CHLORIDE IONCHLORIDE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303