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8DY6:
Vaccine elicited Antibody MU89+S27Y bound to CH848.D949.10.17_N133D_N138T.DS.SOSIP.664 HIV-1 Env trimer
PDB ID:
8DY6
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MMDB ID:
229236
PDB Deposition Date:
2022
Updated in MMDB:
2024/10
Experimental Method:
electron microscopy
Resolution:
4.32 Å
Source Organism:
Human immunodeficiency virus 1
▼
Taxonomy
Molecule
Human immunodeficiency virus 1
A, B, E, F, I, J
Mus musculus
C, D, G, H, K, L
Similar Structures:
VAST+
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Biological Unit for 8DY6: dodecameric; determined by author
Molecular Components in 8DY6
Label
Count
Molecule
Proteins (12 molecules)
A
B
E
F
I
J
6
Envelope Glycoprotein Gp160
C
G
K
3
Mu89+s27y Heavy Chain
D
H
L
3
Mu89+s27y Light Chain
Chemicals and Non-standard biopolymers (132 molecules)
1
90
2-acetamido-2-deoxy-beta-D-glucopyranose
2
23
beta-D-mannopyranose
3
19
alpha-D-mannopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303