8DT8: LM18/Nb136 bispecific tetra-nanobody immunoglobulin in complex with SARS-CoV-2-6P-Mut7 S protein (focused refinement)

PDB ID: 8DT8Download
MMDB ID: 231671
PDB Deposition Date: 2022/7/25
Updated in MMDB: 2024/12
Experimental Method:
electron microscopy
Resolution: 3.34  Å
Source Organism:
Severe acute respiratory syndrome coronavirus 2▼
Similar Structures:
Biological Unit for 8DT8: pentameric; determined by author
Molecular Components in 8DT8
Label Count Molecule
Proteins (5 molecules)
3
Spike Glycoprotein
Molecule annotation
1
Lm18 Nanobody
Molecule annotation
1
Nb136 Nanobody
Molecule annotation
Chemicals and Non-standard biopolymers (13 molecules)
1
13
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303