8DPL: Structure of EBOV GP lacking the mucin-like domain with 2.1.1D5 scFv and 6D6 scFv bound

PDB ID: 8DPLDownload
MMDB ID: 233032
PDB Deposition Date: 2022/7/15
Updated in MMDB: 2023/11
Experimental Method:
electron microscopy
Resolution: 2.53  Å
Source Organism:
Ebola virus - Mayinga, Zaire, 1976▼
Similar Structures:
Biological Unit for 8DPL: 15-meric; determined by author
Molecular Components in 8DPL
Label Count Molecule
Proteins (15 molecules)
3
2.1.1d5 Heavy Chain Variable Domain
Molecule annotation
3
2.1.1d5 Light Chain Variable Domain
Molecule annotation
3
6D6 Single-chain Variable Fragment
Molecule annotation
3
Glycoprotein GP1
Molecule annotation
3
Glycoprotein GP2
Molecule annotation
Chemicals and Non-standard biopolymers (21 molecules)
1
9
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
3
beta-D-mannopyranosebeta-D-mannopyranose
3
9
alpha-D-mannopyranosealpha-D-mannopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303