8DL2: BoGH13ASus from Bacteroides ovatus bound to acarbose

PDB ID: 8DL2Download
MMDB ID: 230523
PDB Deposition Date: 2022/7/6
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 1.99  Å
Source Organism:
Similar Structures:
Biological Unit for 8DL2: monomeric; determined by author and by software (PISA)
Molecular Components in 8DL2
Label Count Molecule
Protein (1 molecule)
1
Alpha Amylase, Catalytic Domain Protein
Molecule annotation
Chemicals and Non-standard biopolymers (18 molecules)
1
8
alpha-D-glucopyranosealpha-D-glucopyranose
2
3
4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose
3
1
beta-D-glucopyranosebeta-D-glucopyranose
4
1
CALCIUM IONCALCIUM ION
5
1
TRIETHYLENE GLYCOLTRIETHYLENE GLYCOL
6
1
GLYCEROLGLYCEROL
7
1
1,2-ETHANEDIOL1,2-ETHANEDIOL
8
1
ACETATE IONACETATE ION
9
1
MANGANESE (II) IONMANGANESE (II) ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303