8DFT: Cryo-EM structure of conjugative pili from Pyrobaculum calidifontis

PDB ID: 8DFTDownload
MMDB ID: 228088
PDB Deposition Date: 2022/6/22
Updated in MMDB: 2024/09
Experimental Method:
electron microscopy
Resolution: 4.1  Å
Source Organism:
Similar Structures:
Biological Unit for 8DFT: eicosameric; determined by author
Molecular Components in 8DFT
Label Count Molecule
Proteins (20 molecules)
20
Pilin Protein
Molecule annotation
Chemicals and Non-standard biopolymers (20 molecules)
1
20
[(2~{S},7~{S},11~{S},15~{S},19~{R},22~{R},26~{S},30~{R},34~{R},38~{S},43~{S},47~{S},51~{S},55~{R},58~{R},62~{S},66~{R},70~{R})-38-(hydroxymethyl)-7,11,15,19,22,26,30,34,43,47,51,55,58,62,66,70-hexadecamethyl-1,4,37,40-tetraoxacyclodoheptacont-2-yl]methanol[(2~{S},7~{S},11~{S},15~{S},19~{R},22~{R},26~{S},30~{R},34~{R},38~{S},43~{S},47~{S},51~{S},55~{R},58~{R},62~{S},66~{R},70~{R})-38-(hydroxymethyl)-7,11,15,19,22,26,30,34,43,47,51,55,58,62,66,70-hexadecamethyl-1,4,37,40-tetraoxacyclodoheptacont-2-yl]methanol
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303