National Center for
Biotechnology Information

8DER: Cryo-EM local refinement of antibody SKV16 in complex with VEEV alphavirus spike glycoprotein

PDB ID:

MMDB ID:

232116

PDB Deposition Date:

2022/6/21

Updated in MMDB:

2024/10

Experimental Method:

electron microscopy

Resolution:

3.3 Å

Source Organism:

Venezuelan equine encephalitis virus▼

Taxonomy	Molecule
Venezuelan equine encephalitis virus	G, E, C, F, B, A
Macaca	X, Y, H, L, W, V

Similar Structures:

Biological Unit for 8DER: dodecameric; determined by author

Molecular Components in 8DER
Label	Count	Molecule
Proteins (12 molecules)
X H W	3	Skv16 FAB Heavy Chain
Y L V	3	Skv16 FAB Light Chain
G E F	3	Spike Glycoprotein E1
C B A	3	Spike Glycoprotein E2
Chemicals and Non-standard biopolymers (10 molecules)
1	9	2-acetamido-2-deoxy-beta-D-glucopyranose
2	1	beta-D-mannopyranose

* Click molecule labels to explore molecular sequence information.

Citing MMDB