8DEQ: Cryo-EM local refinement of antibody SKV09 in complex with VEEV alphavirus spike glycoprotein

PDB ID: 8DEQDownload
MMDB ID: 232115
PDB Deposition Date: 2022/6/21
Updated in MMDB: 2024/10
Experimental Method:
electron microscopy
Resolution: 6  Å
Source Organism:
Venezuelan equine encephalitis virus▼
Similar Structures:
Biological Unit for 8DEQ: octameric; determined by author
Molecular Components in 8DEQ
Label Count Molecule
Proteins (8 molecules)
6
Spike Glycoprotein E1
Molecule annotation
1
Skv09 FAB Heavy Chain
Molecule annotation
1
Skv09 FAB Light Chain
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
6
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303