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8DCM:
Crystal structure of Clostridioides difficile binary toxin proCDTb lacking D4 in complex with BINTOXB/22 Fab
PDB ID:
8DCM
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MMDB ID:
228706
PDB Deposition Date:
2022/6/16
Updated in MMDB:
2024/10
Experimental Method:
x-ray diffraction
Resolution:
2.5 Å
Source Organism:
Mus musculus
▼
Taxonomy
Molecule
Mus musculus
A, B
Clostridioides difficile
C
Similar Structures:
VAST+
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Biological Unit for 8DCM: trimeric; determined by author
Molecular Components in 8DCM
Label
Count
Molecule
Proteins (3 molecules)
A
1
Bintoxb/22 FAB Heavy Chain
B
1
Bintoxb/22 FAB Light Chain
C
1
Adp-ribosylating Binary Toxin Binding Subunit Cdtb
Chemicals and Non-standard biopolymers (4 molecules)
1
3
CALCIUM ION
2
1
SODIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303