8D4R: Crystal Structure of Mosaic HIV-1 Envelope (MosM3.2) in Complex with antibodies PGT124 and 35O22 at 3.8 Angstrom

PDB ID: 8D4RDownload
MMDB ID: 239665
PDB Deposition Date: 2022/6/2
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 3.81  Å
Source Organism:
Human immunodeficiency virus 1▼
Similar Structures:
Biological Unit for 8D4R: hexameric; determined by author
Molecular Components in 8D4R
Label Count Molecule
Proteins (6 molecules)
1
Envelope Glycoprotein Gp120
Molecule annotation
1
Envelope Glycoprotein Gp41
Molecule annotation
1
35o22 FAB Heavy Chain
Molecule annotation
1
35o22 FAB Light Chain
Molecule annotation
1
Pgt124 FAB Light Chain
Molecule annotation
1
Pgt124 FAB Heavy Chain
Molecule annotation
Chemicals and Non-standard biopolymers (53 molecules)
1
14
alpha-D-mannopyranosealpha-D-mannopyranose
2
34
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
3
5
beta-D-mannopyranosebeta-D-mannopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303