8D42: Human mitochondrial DNA polymerase gamma ternary complex with GT basepair in editing conformer (composite)

PDB ID: 8D42Download
MMDB ID: 230520
PDB Deposition Date: 2022/6/1
Updated in MMDB: 2024/10
Experimental Method:
electron microscopy
Resolution: 2.91  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 8D42: pentameric; determined by author
Molecular Components in 8D42
Label Count Molecule
Proteins (3 molecules)
1
DNA Polymerase Subunit Gamma-1
Molecule annotation
2
DNA Polymerase Subunit Gamma-2, Mitochondrial
Molecule annotation
Nucleotides(2 molecules)
1
DNA (5'-d(p*ap*ap*ap*cp*gp*ap*cp*gp*gp*cp*cp*ap*gp*tp*gp*cp*cp*ap*tp*ap*t)-3')
Molecule annotation
1
DNA (5'-d(p*gp*gp*tp*ap*tp*gp*gp*cp*ap*cp*tp*gp*gp*cp*cp*gp*tp*cp*gp*tp*tp*t)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (4 molecules)
1
3
CALCIUM IONCALCIUM ION
2
1
2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303