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8D2M:
Covalent Schiff base complex of YedK C2A and abasic DNA
PDB ID:
8D2M
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MMDB ID:
228963
PDB Deposition Date:
2022/5/30
Updated in MMDB:
2024/10
Experimental Method:
x-ray diffraction
Resolution:
1.821 Å
Source Organism:
synthetic construct
▼
Taxonomy
Molecule
synthetic construct
C, D
Escherichia coli
A, B
Similar Structures:
VAST+
Download sequence data
Molecular Components in 8D2M
Label
Count
Molecule
Proteins (2 molecules)
A
B
2
Abasic Site Processing Protein Yedk
Nucleotides(2 molecules)
C
D
2
DNA (5'-d(*gp*tp*cp*(ped)p*gp*gp*a)-3')
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303