8D0Y: Crystal Structure of HIV-1 BG505 SOSIPv8 Trimer in Complex with CD4bs targeting antibody 21N13 and interface targeting antibody 35O22 at 4.7 Angstrom

PDB ID: 8D0YDownload
MMDB ID: 233018
PDB Deposition Date: 2022/5/26
Updated in MMDB: 2023/11
Experimental Method:
x-ray diffraction
Resolution: 4.7  Å
Source Organism:
Human immunodeficiency virus 1▼
Similar Structures:
Biological Unit for 8D0Y: octadecameric; determined by author
Molecular Components in 8D0Y
Label Count Molecule
Proteins (18 molecules)
3
35o22scfv Heavy Chain Variable
Molecule annotation
3
35o22scfv Light Chain Variable
Molecule annotation
3
Pgt124 FAB Heavy Chain
Molecule annotation
3
Pgt124 FAB Light Chain
Molecule annotation
3
Bg505sosipv8 Gp120
Molecule annotation
3
Bg505sosipv8 Gp41
Molecule annotation
Chemicals and Non-standard biopolymers (84 molecules)
1
66
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
3
beta-D-mannopyranosebeta-D-mannopyranose
3
15
alpha-D-mannopyranosealpha-D-mannopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303